PUBLICATIONS

Pre-print

  • Not now

Paper

  • Masaru Bamba, Turgut Yigit Akyol, Yusuke Azuma, Johan Quilbe, Stig Uggerhøj Andersen, Shusei Sato. in press. Synergistic effects of plant genotype and soil microbiome on growth in Lotus japonicus. FEMS Microbiology Ecology
  • Maria Isabel Fuentes-Merlos, Masaru Bamba, Shusei Sato, Atsushi Higashitani. (2023) Self-grafting induced epigenetic changes leading to drought stress tolerance in tomato plants. DNA Res. [Link][プレスリリース][報道]
  • Yusdar Mustamin, Turgut Yigit Akyol, Max Gordon, Andi Madihah Manggabarani, Yoshiko Isomura, Yasuko Kawamura, Masaru Bamba, Cranos Williams, Stig Uggerhøj Andersen, Shusei Sato. (2022) Receptor-like kinases FER and SRK mediate Lotus japonicus freezing tolerance and climate adaptation. PlantPhysiology. [Link][プレスリリース][報道]
  • Daisuke Sekine, Satoshi Oku, Tsukasa Nunome, Hideki Hirakawa, Mai Tsujimura, Toru Terachi, Atsushi Toyoda, Masayoshi Shigyo, Shusei Sato, and Hikaru Tsukazaki. (2022) Development of a genome-wide marker design workflow for onions and its application in target amplicon sequencing-based genotyping. DNA Res. [Link][プレスリリース][報道]
  • Eigo Fukai, Manabu Yoshikawa, Niraj Shah, Niels Sandal, Akio Miyao, Seijiro Ono, HidekiHirakawa, Turgut Yigit Akyol, Yosuke Umehara, Ken-Ichi Nonomura, Jens Stougaard,Hirohiko Hirochika, Makoto Hayashi, Shusei Sato, Stig Uggerhøj Andersen, Keiichi Okazaki. (2022) Widespread and transgenerational retrotransposon activation in inter- and intraspecies recombinant inbred populations of Lotus japonicus. Plant J. [Link][プレスリリース][報道]
  • Maria Isabel Fuentes-Merlos, Masaru Bamba, Shusei Sato and Atsushi Higashitani. (2022) Comparative Transcriptome Analysis of Grafted Tomato with Drought Tolerance. Plants [Link]
  • Andi Madihah Manggabarani, Takuyu Hashiguchi, Masatsugu Hashiguchi, Atsushi Hayashi, Masataka Kikuchi, Yusdar Mustamin, Masaru Bamba, Kunihiro Kodama, Takanari Tanabata, Sachiko Isobe, Hidenori Tanaka, Ryo Akashi, Akihiro Nakaya, Shusei Sato. (2022) Construction of prediction models for growth traits of soybean cultivars based on phenotyping in diverse genotype and environment combinations. DNA Research [Link]
  • Masayuki Shimamura, Takashi Kumaki, Shun Hashimoto, Kazuhiko Saeki, Shin-ichi Ayabe, Atsushi Higashitani, Tomoyoshi Akashi, Shusei Sato, Toshio Aoki. (2022) Phenolic Acids Induce Nod Factor Production in Lotus japonicus–Mesorhizobium Symbiosis. Microbes and Environments [Link]
  • Satoshi Fujito, Turgut Yigit Akyol, Takuya Mukae, Tadayuki Wako, Ken-ichiro Yamashita, Hikaru Tsukazaki, Hideki Hirakawa, Keisuke Tanaka, Yoko Mine, Shusei Sato & Masayoshi Shigyo. (2021) Construction of a high-density linkage map and graphical representation of the arrangement of transcriptome-based unigene markers on the chromosomes of onion, Allium cepa L. BMC Genomics [Link]
  • Richard Finkers, Martijn van Kaauwen, Kai Ament, Karin Burger-Meijer, Raymond Egging, Henk Huits, Linda Kodde, Laurens Kroon, Masayoshi Shigyo, Shusei Sato, Ben Vosman, Wilbert van Workum, Olga Scholten. (2021) Insights from the first genome assembly of Onion (Allium cepa). G3 Genes|Genomes|Genetics. [Link]
  • Haruka Arashida, Haruka Odake, Masayuki Sugawara, Ryota Noda, Kaori Kakizaki, Satoshi Ohkubo, Hisayuki Mitsui, Shusei Sato and Kiwamu Minamisawa. (2021) Evolution of rhizobial symbiosis islands through insertion sequence-mediated deletion and duplication. ISME J. [Link] [プレスリリース] [報道]
  • Ikuko Kusaba, Takahiro Nakao, Hiroko Maita, Shusei Sato, Ryota Chijiiwa, Emi Yamada, Susumu Arima, Mareshige Kojoma, Kanji Ishimaru, Ryo Akashi, Akihiro Suzuki. (2021) Mesorhizobium sp. J8 can establish symbiosis with Glycyrrhiza uralensis, increasing glycyrrhizin production. Plant Biotechnology [Link]
  • Natalya Kudryavtseva, Aleksey Ermolaev, Gennady Karlov, Ilya Kirov, Masayoshi Shigyo, Shusei Sato and Ludmila Khrustaleva (2021) A Dual-Color Tyr-FISH Method for Visualizing Genes/Markers on Plant Chromosomes to Create Integrated Genetic and Cytogenetic Maps [Link]
  • Safirah Tasa Nerves Ratu, Albin Teulet, Hiroki Miwa, Sachiko Masuda, Hien P. Nguyen, Michiko Yasuda, Shusei Sato, Takakazu Kaneko, Makoto Hayashi, Eric Giraud & Shin Okazaki. (2020) Rhizobia use a pathogenic-like effector to hijack leguminous nodulation signalling. Scientific Reports [Link]
  • Yuki Nishida,Reona Hiraoka,Satomi Kawano,Norio Suganuma,Shusei Sato,Satoshi Watanabe,Toyoaki Anai,Susumu Arima,Akiyoshi Tominaga and Akihiro Suzuki. (2020) SEN1 gene from Lotus japonicus MG20 improves nitrogen fixation and plant growth. Soil Science and Plant Nutrition, 1-6. [Link]
  • Masaru Bamba, Seishiro Aoki, Tadashi Kajita, Hiroaki Setoguchi, Yasuyuki Watano, Shusei Sato, Takashi Tsuchimatsu. (2020) Massive rhizobial genomic variations associated with partner quality in Lotus–Mesorhizobium symbiosis. FEMS Microbiology Ecology [Link]
  • Arina Shrestha, Sihui Zhong, Jasmine Therrien, Terry Huebert, Shusei Sato, Terry Mun, Stig U. Andersen, Jens Stougaard, Agnes Lepage, Andreas Niebel, Loretta Ross, and Krzysztof Szczyglowski. (2020) Lotus japonicus Nuclear Factor YA1, a nodule emergence stage‐specific regulator of auxin signalling. New Phytologist [Link]
  • Nadia Kamal, Terry Mun, Dugald Reid, Jie-shun Lin, Turgut Yigit Akyol, Niels Sandal, Torben Asp, Hideki Hirakawa, Jens Stougaard, Klaus F. X. Mayer, Shusei Sato, and Stig Uggerhøj Andersen. (2020) Insights into the evolution of symbiosis gene copy number and distribution from a chromosome-scale Lotus japonicus Gifu genome sequence. DNA Research, dsaa015 [Link]
  • Shah N, Wakabayashi T, Kawamura Y, Skovbjerg CK, Wang MZ, Mustamin Y, Isomura Y, Gupta V, Jin H, Mun T, Sandal N, Azuma F, Fukai E, Seren Ü, Kusakabe S, Kikuchi Y, Nitanda S, Kumaki T, Hashiguchi M, Tanaka H, Hayashi A, Sønderkær M, Nielsen KL, Schneeberger K, Vilhjalmsson B, Akashi R, Stougaard J, Sato S*, Schierup MH*, Andersen SU*. (2020) Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan. Nature Communications, 11: 1-15. 2. [Link] [プレスリリース] [報道]
  • Kusakabe S, Higasitani N, Kaneko T, Yasuda M, Miwa H, Okazaki S, Saeki K, Higashitani A, Sato S*. (2020) Lotus Accessions Possess Multiple Checkpoints Triggered by Different Type III Secretion System Effectors of the Wide-Host-Range Symbiont Bradyrhizobium elkanii USDA61. Microbes and environments, 35: ME19141. 3. [Link]
  • Shimoda Y, Nishigaya Y, Yamaya-Ito H, Inagaki N, Umehara Y, Hirakawa H, Sato S, Yamazaki T, Hayashi M. (2020) The rhizobial autotransporter determines the symbiotic nitrogen fixation activity of Lotus japonicus in a host-specific manner. Proc Natl Acad Sci U SA. 117:1806-1815. 4. [Link] [プレスリリース]
  • Akyol TY, Niwa R, Hirakawa H, Maruyama H, Sato T, Suzuki T, Fukunaga A, Sato T, Yoshida S, Tawaraya K, Saito M, Ezawa T, Sato S* (2019) Impact of Introduction of Arbuscular Mycorrhizal Fungi on the Root Microbial Community in Agricultural Fields. Microbes and environments, 34:23-32. 5. [Link]
  • Bamba M, Aoki S, Kajita T, Setoguchi H, Watano Y, Sato S, Tsuchimatsu T. (2019) Exploring Genetic Diversity and Signatures of Horizontal Gene Transfer in Nodule Bacteria Associated with Lotus japonicus in Natural Environments. Mol Plant Microbe Interact. 32:1110-1120. 6. [Link] [プレスリリース]
  • Abdelrahman M, Hirata S, Sawada Y, Hirai MY, Sato S, Hirakawa H, Mine Y, Tanaka K, Shigyo M. (2019) Widely targeted metabolome and transcriptome landscapes of Allium fistulosum–A. cepa chromosome addition lines revealed a flavonoid hot spot on chromosome 5A. Scientific reports, 9: 1-15 7. [Link] [プレスリリース]
  • Hashiguchi M, Tanaka H, Muguerza M, Akashi R, Sandal NN, Andersen SU, Sato S*. (2018) Lotus japonicus Genetic, Mutant, and Germplasm Resources. Curr Protoc Plant Biol. 3:e20070. 8. [Link]
  • Sugawara M, Takahashi S, Umehara Y, Iwano H, Tsurumaru H, Odake H, Suzuki Y, Kondo H, Konno Y, Yamakawa T, Sato S, Mitsui H, Minamisawa K. (2018) Variation in bradyrhizobial NopP effector determines symbiotic incompatibility with Rj2-soybeans via effector-triggered immunity. Nature communications, 9: 1-12. 9. [Link]
  • Niwa R, Koyama T, Sato T, Adachi K, Tawaraya K, Sato S, Hirakawa H, Yoshida S, Ezawa T. (2018) Dissection of niche competition between introduced and indigenous arbuscular mycorrhizal fungi with respect to soybean yield responses. Scientific reports, 8: 1-11. [Link]

Other literature

  • Masaru Bamba, Kenta Shirasawa, Sachiko Isobe, Nadia Kamal, Klaus Mayer, and Shusei Sato (2022) Plant Genomics. in “Plant Omics: Advances in Big Data Biology” (Edited by Drs. Hajime Ohyanagi, Eiji Yamamoto, Kentaro Yano). CABI, Nosworthy Way, Wallingford OX10 8DE, UK.[Link]
  • 番場大, 佐藤修正, 土松隆 (2022) マメ科植物の生育を促す根粒菌の多様性解明. バイオスティミュラントハンドブック ~植物の生理活性プロセスから資材開発，適用事例まで~ エヌ・ティー・エス pp. 179-184 [Link]
  • Shusei Sato and Stig U. Anderson. (2014) Genome Sequencing. In Satoshi Tabata and Jens Stougaard (Eds.) The Lotus japonicus Genome. Springer pp.35-40 [Link]
  • Niels Sandal and Shusei Sato (2014) Genetic Linkage Maps, Synteny and Map-based Cloning. In Satoshi Tabata and Jens Stougaard (Eds.) The Lotus japonicus Genome. Springer pp.21-31 [Link]